Article: Derks et al, 2022

Peer reviewed article: Derks, J., Leduc, A., Wallmann, G. et al. Increasing the throughput of sensitive proteomics by plexDIA. Nat Biotechnol (2022). 10.1038/s41587-022-01389-w , Nature Research Briefing

Single-cell proteomics method: plexDIA

Sample preparation method: nPOP

 

 

plexDIA Data plexDIA @ massIVE plexDIA code

 

plexDIA data organized by experiments

All RAW and processed data from the plexDIA article are organized in this directory. Below are links to processed data from single cells, cells isolated based in DNA content (cell cycle phases) and from LFQ-bench style benchmarking experiments.

 

plexDIA RAW data and search results from DIA-NN

The repositories below contain RAW mass-spectrometry data files generated by a first-generation Q-exactive instrument as well as the search results from analyzing the RAW files by DIA-NN. Searching plexDIA data with DIA-NN is described in this tutorial.